Removed

sci-libs/scikit-learn/Manifest

@@ -1 +0,0 @@
-DIST scikit-learn-1.3.2.gh.tar.gz 7650823 BLAKE2B 170699917f46d6d3f4b9ebc314bc1ec45687dad0a4aec5d2cee6e288b5dbe508bad6dd80406501f289a33593c6482067393e9dc28155f85a4872a34523bf4199 SHA512 a3799e9b39b755a50ba225f836904a378f7d83a08274c614d0485e4d4d4a7b0c7adba2dbb6612f2ccb4e5167f872214a2853eff69d767dc70f52369bda7a230b

sci-libs/scikit-learn/files/eb85684feb0505694e66365ba9f4d10a409f8f0b.patch

@@ -1,107 +0,0 @@
-From eb85684feb0505694e66365ba9f4d10a409f8f0b Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?J=C3=A9r=C3=A9mie=20du=20Boisberranger?=
- <34657725+jeremiedbb@users.noreply.github.com>
-Date: Wed, 11 Oct 2023 11:43:47 +0200
-Subject: [PATCH] MAINT Follow cython performance hints (#27521)
-
----
- .../_middle_term_computer.pyx.tp                   |  2 +-
- .../preprocessing/_csr_polynomial_expansion.pyx    |  2 +-
- sklearn/tree/_splitter.pyx                         |  2 +-
- sklearn/tree/_utils.pxd                            |  2 +-
- sklearn/tree/_utils.pyx                            | 14 ++++++--------
- 5 files changed, 10 insertions(+), 12 deletions(-)
-
-diff --git a/sklearn/metrics/_pairwise_distances_reduction/_middle_term_computer.pyx.tp b/sklearn/metrics/_pairwise_distances_reduction/_middle_term_computer.pyx.tp
-index f2d89ed65909c..bfe465394c4d2 100644
---- a/sklearn/metrics/_pairwise_distances_reduction/_middle_term_computer.pyx.tp
-+++ b/sklearn/metrics/_pairwise_distances_reduction/_middle_term_computer.pyx.tp
-@@ -82,7 +82,7 @@ cdef void _middle_term_sparse_dense_{{name_suffix}}(
-     intp_t Y_end,
-     bint c_ordered_middle_term,
-     float64_t * dist_middle_terms,
--) nogil:
-+) noexcept nogil:
-     # This routine assumes that dist_middle_terms is a pointer to the first element
-     # of a buffer filled with zeros of length at least equal to n_X × n_Y, conceptually
-     # representing a 2-d C-ordered of F-ordered array.
-diff --git a/sklearn/preprocessing/_csr_polynomial_expansion.pyx b/sklearn/preprocessing/_csr_polynomial_expansion.pyx
-index 90f81c0399a6e..017af83f035b2 100644
---- a/sklearn/preprocessing/_csr_polynomial_expansion.pyx
-+++ b/sklearn/preprocessing/_csr_polynomial_expansion.pyx
-@@ -166,7 +166,7 @@ cpdef void _csr_polynomial_expansion(
-     INDEX_B_t[:] result_indptr,     # OUT
-     FLAG_t interaction_only,
-     FLAG_t degree
--) nogil:
-+):
-     """
-     Perform a second or third degree polynomial or interaction expansion on a
-     compressed sparse row (CSR) matrix. The method used only takes products of
-diff --git a/sklearn/tree/_splitter.pyx b/sklearn/tree/_splitter.pyx
-index a9d3a169ec84a..81cd61ed22631 100644
---- a/sklearn/tree/_splitter.pyx
-+++ b/sklearn/tree/_splitter.pyx
-@@ -263,7 +263,7 @@ cdef inline void shift_missing_values_to_left_if_required(
-     SplitRecord* best,
-     intp_t[::1] samples,
-     intp_t end,
--) nogil:
-+) noexcept nogil:
-     cdef intp_t i, p, current_end
-     # The partitioner partitions the data such that the missing values are in
-     # samples[-n_missing:] for the criterion to consume. If the missing values
-diff --git a/sklearn/tree/_utils.pxd b/sklearn/tree/_utils.pxd
-index 4167230bfbf4d..b59d18879ca94 100644
---- a/sklearn/tree/_utils.pxd
-+++ b/sklearn/tree/_utils.pxd
-@@ -39,7 +39,7 @@ ctypedef fused realloc_ptr:
-     (Cell*)
-     (Node**)
- 
--cdef realloc_ptr safe_realloc(realloc_ptr* p, size_t nelems) except * nogil
-+cdef int safe_realloc(realloc_ptr* p, size_t nelems) except -1 nogil
- 
- 
- cdef cnp.ndarray sizet_ptr_to_ndarray(intp_t* data, intp_t size)
-diff --git a/sklearn/tree/_utils.pyx b/sklearn/tree/_utils.pyx
-index 3c0c312b25fbe..b6115d4f21d18 100644
---- a/sklearn/tree/_utils.pyx
-+++ b/sklearn/tree/_utils.pyx
-@@ -22,22 +22,20 @@ from ..utils._random cimport our_rand_r
- # Helper functions
- # =============================================================================
- 
--cdef realloc_ptr safe_realloc(realloc_ptr* p, size_t nelems) except * nogil:
-+cdef int safe_realloc(realloc_ptr* p, size_t nelems) except -1 nogil:
-     # sizeof(realloc_ptr[0]) would be more like idiomatic C, but causes Cython
-     # 0.20.1 to crash.
-     cdef size_t nbytes = nelems * sizeof(p[0][0])
-     if nbytes / sizeof(p[0][0]) != nelems:
-         # Overflow in the multiplication
--        with gil:
--            raise MemoryError("could not allocate (%d * %d) bytes"
--                              % (nelems, sizeof(p[0][0])))
-+        raise MemoryError(f"could not allocate ({nelems} * {sizeof(p[0][0])}) bytes")
-+
-     cdef realloc_ptr tmp = <realloc_ptr>realloc(p[0], nbytes)
-     if tmp == NULL:
--        with gil:
--            raise MemoryError("could not allocate %d bytes" % nbytes)
-+        raise MemoryError(f"could not allocate {nbytes} bytes")
- 
-     p[0] = tmp
--    return tmp  # for convenience
-+    return 0
- 
- 
- def _realloc_test():
-@@ -111,7 +109,7 @@ cdef class WeightedPQueue:
-         or 0 otherwise.
-         """
-         self.array_ptr = 0
--        # Since safe_realloc can raise MemoryError, use `except *`
-+        # Since safe_realloc can raise MemoryError, use `except -1`
-         safe_realloc(&self.array_, self.capacity)
-         return 0
- 

sci-libs/scikit-learn/scikit-learn-1.3.2.ebuild

@@ -1,69 +0,0 @@
-# Copyright 2020-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_EXT=1
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{10..11} )
-
-inherit distutils-r1
-
-DESCRIPTION="Machine learning library for Python"
-HOMEPAGE="https://scikit-learn.org/stable/"
-SRC_URI="https://github.com/scikit-learn/scikit-learn/archive/${PV}.tar.gz -> ${P}.gh.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~arm64 ~ppc64 ~riscv ~x86 ~arm64-macos ~x64-macos"
-IUSE="examples"
-
-# Fatal Python error: Segmentation fault
-RESTRICT="test"
-
-DEPEND="
-	virtual/blas:=
-	virtual/cblas:=
-"
-RDEPEND="
-	${DEPEND}
-	dev-python/wheel[${PYTHON_USEDEP}]
-	dev-python/joblib[${PYTHON_USEDEP}]
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/threadpoolctl[${PYTHON_USEDEP}]
-"
-# <cython-3: https://bugs.gentoo.org/911369
-BDEPEND="
-	dev-python/cython[${PYTHON_USEDEP}]
-"
-
-PATCHES=(
-	"${FILESDIR}/210550007e04a096e0e600c6586da677c33d6d90.patch"
-	"${FILESDIR}/eb85684feb0505694e66365ba9f4d10a409f8f0b.patch"
-)
-
-distutils_enable_tests pytest
-# For some reason this wants to use urllib to fetch things from the internet
-# distutils_enable_sphinx doc \
-# 	dev-python/matplotlib \
-# 	dev-python/memory-profiler \
-# 	dev-python/numpydoc \
-# 	dev-python/pandas \
-# 	dev-python/pillow \
-# 	dev-python/seaborn \
-# 	dev-python/sphinx-gallery \
-# 	dev-python/sphinx-prompt \
-# 	sci-libs/scikit-image
-
-python_test() {
-	# This needs to be run in the install dir
-	cd "${WORKDIR}/${P}-${EPYTHON//./_}/install/usr/lib/${EPYTHON}/site-packages/sklearn" || die
-	distutils-r1_python_test
-}
-
-python_install_all() {
-	find "${S}" -name \*LICENSE.txt -delete || die
-	distutils-r1_python_install_all
-	use examples && dodoc -r examples
-}